The Cummings Lab
The Cummings Lab
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Teaching
Bioinformatics and Genomics (CBMG688Y)
Molecular Evolution (BSCI471 and BIOL671)
Research Methods and Study Design (DATA698)
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Software
BEAGLE
A critical assessment of gene catalogs for metagenomic analysis
Paper assessing gene catalogs for metagenomic analysis published
BEAGLE Software
A general purpose library for evaluating the likelihood of sequence evolution on trees
National Science Foundation award to increase performance of BEAGLE library for SARS-CoV-2 genomic data
Cummings Receives NSF Funding to Improve Analyses of COVID-19 Genomic Data
BEAGLE 3: improved performance, scaling, and usability for a high-performance computing library for statistical phylogenetics
Paper describing BEAGLE library version 3 published
Rerooting trees increases opportunities for concurrent computation and results in markedly improved performance for phylogenetic inference
Paper describing increased performance from rerooting trees published
BEAGLE project wins NVIDIA Global Impact Award
UMD Computational Biologists Win NVIDIA Global Impact Award
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